Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC092337.1-201ENST00000568699 1129 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC025048.3-201ENST00000590609 569 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AL365330.1-201ENST00000607459 531 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AL162274.1-201ENST00000617191 1098 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AC005702.4-201ENST00000618393 416 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.9■□□□□ 0.46
HDAC6Q9UBN7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HDAC6Q9UBN7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 AC112492.5-201ENST00000421897 457 ntBASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 ACA64.2-201ENST00000459014 129 ntBASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HDAC6Q9UBN7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HDAC6Q9UBN7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms