Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AL662844.4-201ENST00000606367 2838 ntBASIC14.54□□□□□ -0.08
LRFN1Q9P244 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AC098850.1-201ENST00000419919 790 ntBASIC14.53□□□□□ -0.08
LRFN1Q9P244 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 RN7SL399P-201ENST00000471648 279 ntBASIC14.53□□□□□ -0.08
LRFN1Q9P244 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AC132938.2-201ENST00000579188 680 ntBASIC14.53□□□□□ -0.08
LRFN1Q9P244 TMEM261P1-201ENST00000604899 340 ntBASIC14.53□□□□□ -0.08
LRFN1Q9P244 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AL591163.1-201ENST00000641757 987 ntBASIC14.53□□□□□ -0.08
LRFN1Q9P244 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.53□□□□□ -0.08
LRFN1Q9P244 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRFN1Q9P244 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRFN1Q9P244 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRFN1Q9P244 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRFN1Q9P244 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRFN1Q9P244 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
LRFN1Q9P244 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 OR8S1-201ENST00000310194 1080 ntBASIC14.52□□□□□ -0.09
LRFN1Q9P244 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 AC074338.1-201ENST00000416825 156 ntBASIC14.52□□□□□ -0.09
LRFN1Q9P244 AC007274.1-201ENST00000439805 662 ntBASIC14.52□□□□□ -0.09
LRFN1Q9P244 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 AL008721.1-201ENST00000609964 604 ntBASIC14.52□□□□□ -0.09
LRFN1Q9P244 IGHV3-72-202ENST00000621503 303 ntBASIC14.52□□□□□ -0.09
LRFN1Q9P244 AL158212.4-201ENST00000624062 1286 ntBASIC14.52□□□□□ -0.09
LRFN1Q9P244 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.52□□□□□ -0.09
LRFN1Q9P244 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRFN1Q9P244 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms