Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 AL031731.1-201ENST00000642131 2094 ntBASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 GGT4P-201ENST00000623672 1708 ntBASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 ALOX12P2-203ENST00000570921 1945 ntBASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 AC007191.1-201ENST00000623179 2995 ntBASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 AC027612.4-201ENST00000605371 583 ntBASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
CALCOCO1Q9P1Z2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.39■□□□□ 0.38
CALCOCO1Q9P1Z2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AC140658.5-201ENST00000438532 169 ntBASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AC091812.2-201ENST00000619081 385 ntBASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALCOCO1Q9P1Z2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms