Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 MIR6775-201ENST00000617557 69 ntBASIC18.92■□□□□ 0.62
SALL1Q9NSC2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 PAUPAR-201ENST00000630360 2965 ntBASIC18.91■□□□□ 0.62
SALL1Q9NSC2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 AP001889.1-201ENST00000525414 633 ntBASIC18.91■□□□□ 0.62
SALL1Q9NSC2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 AC009486.1-201ENST00000569860 813 ntBASIC18.91■□□□□ 0.62
SALL1Q9NSC2 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.91■□□□□ 0.62
SALL1Q9NSC2 COX11-210ENST00000639671 696 ntBASIC18.91■□□□□ 0.62
SALL1Q9NSC2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SALL1Q9NSC2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 PTP4A1P2-201ENST00000546033 454 ntBASIC18.9■□□□□ 0.62
SALL1Q9NSC2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AP001063.1-201ENST00000568332 529 ntBASIC18.9■□□□□ 0.62
SALL1Q9NSC2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AC093813.1-201ENST00000605066 256 ntBASIC18.9■□□□□ 0.62
SALL1Q9NSC2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AL022328.1-201ENST00000610050 478 ntBASIC18.9■□□□□ 0.62
SALL1Q9NSC2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
SALL1Q9NSC2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
SALL1Q9NSC2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SALL1Q9NSC2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 AC012441.1-201ENST00000446669 685 ntBASIC18.89■□□□□ 0.61
SALL1Q9NSC2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 AC107373.2-201ENST00000607735 490 ntBASIC18.89■□□□□ 0.61
SALL1Q9NSC2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms