Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR9Q9NR96 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.69■□□□□ 0.26
TLR9Q9NR96 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 FAM86HP-204ENST00000513466 959 ntBASIC16.69■□□□□ 0.26
TLR9Q9NR96 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 AL118558.3-201ENST00000607414 1079 ntBASIC16.69■□□□□ 0.26
TLR9Q9NR96 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 MIR6727-201ENST00000620702 65 ntBASIC16.69■□□□□ 0.26
TLR9Q9NR96 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.69■□□□□ 0.26
TLR9Q9NR96 DRD5P1-201ENST00000456605 1438 ntBASIC16.69■□□□□ 0.26
TLR9Q9NR96 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TLR9Q9NR96 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 AL607033.1-201ENST00000623900 1599 ntBASIC16.68■□□□□ 0.26
TLR9Q9NR96 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 OR6D1P-203ENST00000641209 4860 ntBASIC16.68■□□□□ 0.26
TLR9Q9NR96 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 MIR326-201ENST00000362220 95 ntBASIC16.68■□□□□ 0.26
TLR9Q9NR96 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 AC025279.2-201ENST00000569730 653 ntBASIC16.68■□□□□ 0.26
TLR9Q9NR96 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TLR9Q9NR96 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.68■□□□□ 0.26
TLR9Q9NR96 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms