Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 KRT18P31-201ENST00000506277 1292 ntBASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 MIR3652-201ENST00000579335 131 ntBASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 AC006504.4-201ENST00000592118 1568 ntBASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
C12orf4Q9NQ89 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.9□□□□□ -0.19
C12orf4Q9NQ89 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
C12orf4Q9NQ89 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
C12orf4Q9NQ89 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
C12orf4Q9NQ89 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MIR648-201ENST00000385046 94 ntBASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 LINC02447-202ENST00000501888 2146 ntBASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 AC025062.2-201ENST00000605477 670 ntBASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms