Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 AC140658.5-201ENST00000438532 169 ntBASIC17.7■□□□□ 0.42
CBX8Q9HC52 HCG4B-203ENST00000450128 991 ntBASIC17.7■□□□□ 0.42
CBX8Q9HC52 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 AC092910.1-201ENST00000482027 1129 ntBASIC17.7■□□□□ 0.42
CBX8Q9HC52 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 FAM215A-202ENST00000632077 792 ntBASIC17.7■□□□□ 0.42
CBX8Q9HC52 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX8Q9HC52 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AC096734.2-201ENST00000562054 433 ntBASIC17.69■□□□□ 0.42
CBX8Q9HC52 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CBX8Q9HC52 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX8Q9HC52 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX8Q9HC52 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX8Q9HC52 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms