Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PIN1P1-201ENST00000412108 996 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 DFFBP1-201ENST00000433250 979 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 RARRES2P5-201ENST00000564013 466 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AL391825.1-201ENST00000457671 1364 ntBASIC18.6■□□□□ 0.57
RNF41Q9H4P4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC055876.2-201ENST00000531834 546 ntBASIC18.6■□□□□ 0.57
RNF41Q9H4P4 RRP7BP-205ENST00000566851 833 ntBASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL133267.1-201ENST00000398220 340 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL353779.1-201ENST00000434793 351 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 KRT18P43-201ENST00000469825 1281 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC023310.3-201ENST00000557027 670 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC100756.1-201ENST00000562736 682 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC138749.3-201ENST00000567691 622 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL132655.2-201ENST00000596276 594 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC099568.2-201ENST00000609194 695 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL391069.4-201ENST00000609583 481 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC116165.1-201ENST00000611806 668 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL158212.4-201ENST00000624062 1286 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 AC007541.1-201ENST00000570282 1469 ntBASIC18.58■□□□□ 0.57
RNF41Q9H4P4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 1015.5 ms