Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PIN1P1-201ENST00000412108 996 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 DFFBP1-201ENST00000433250 979 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 RARRES2P5-201ENST00000564013 466 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AL391825.1-201ENST00000457671 1364 ntBASIC18.6■□□□□ 0.57
RNF41Q9H4P4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC055876.2-201ENST00000531834 546 ntBASIC18.6■□□□□ 0.57
RNF41Q9H4P4 RRP7BP-205ENST00000566851 833 ntBASIC18.6■□□□□ 0.57
RNF41Q9H4P4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF41Q9H4P4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL133267.1-201ENST00000398220 340 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL353779.1-201ENST00000434793 351 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 KRT18P43-201ENST00000469825 1281 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC023310.3-201ENST00000557027 670 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC100756.1-201ENST00000562736 682 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC138749.3-201ENST00000567691 622 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL132655.2-201ENST00000596276 594 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC099568.2-201ENST00000609194 695 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL391069.4-201ENST00000609583 481 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AC116165.1-201ENST00000611806 668 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 AL158212.4-201ENST00000624062 1286 ntBASIC18.59■□□□□ 0.57
RNF41Q9H4P4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF41Q9H4P4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 AC007541.1-201ENST00000570282 1469 ntBASIC18.58■□□□□ 0.57
RNF41Q9H4P4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms