Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 FAM220BP-201ENST00000377689 816 ntBASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AC007967.2-201ENST00000432613 625 ntBASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 FAM45BP-202ENST00000592932 1624 ntBASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR2J3Q9H1A7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 IL9RP2-201ENST00000423948 1312 ntBASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 RPS8P6-201ENST00000426177 609 ntBASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 FAM197Y3-203ENST00000618346 717 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms