Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 LINC00552-201ENST00000625151 2579 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC131009.4-201ENST00000624048 1740 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC005622.1-201ENST00000636801 1703 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 COPE-203ENST00000351079 907 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ANKRD20A18P-201ENST00000359341 492 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 LINC00982-205ENST00000420957 435 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 FAM201B-201ENST00000458407 597 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC098590.1-201ENST00000468126 897 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 HMGB3P14-201ENST00000494195 599 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MIR4492-201ENST00000581627 80 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC124864.1-201ENST00000623408 392 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC010947.1-201ENST00000623454 693 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AL023973.1-201ENST00000624619 620 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AP001350.2-201ENST00000625104 1094 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 CFTRP2-201ENST00000634304 199 ntBASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms