Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 PRSS30P-206ENST00000641773 873 ntBASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 CNN2P10-201ENST00000443067 918 ntBASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 AC005077.2-201ENST00000449786 690 ntBASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 HIST2H2BC-201ENST00000498492 580 ntBASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 MIR4313-201ENST00000580760 101 ntBASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 AC020914.3-201ENST00000594712 304 ntBASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 PCDHA14-201ENST00000506751 2298 ntBASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RTFDC1Q9BY42 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 RNU1-114P-201ENST00000365297 166 ntBASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTFDC1Q9BY42 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 POM121L10P-201ENST00000436994 1285 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 HSPB1P2-201ENST00000448722 546 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 AC105129.2-201ENST00000559536 390 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 MIR3619-201ENST00000579667 83 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 ECM1P1-201ENST00000604092 1279 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms