Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AC097493.3-201ENST00000509725 367 ntBASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AC073592.8-201ENST00000624126 511 ntBASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AC006449.6-201ENST00000612330 2296 ntBASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 AL035456.1-201ENST00000456064 1369 ntBASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 MIR3197-201ENST00000582241 73 ntBASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 U82695.1-201ENST00000635752 1889 ntBASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.36□□□□□ -0.27
PCGF1Q9BSM1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCGF1Q9BSM1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms