Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS2Q99743 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
NPAS2Q99743 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC012569.1-201ENST00000591191 1524 ntBASIC15.57■□□□□ 0.08
NPAS2Q99743 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC126755.1-201ENST00000525846 6405 ntBASIC15.57■□□□□ 0.08
NPAS2Q99743 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
NPAS2Q99743 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NPAS2Q99743 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 HAUS4P1-201ENST00000406739 1145 ntBASIC15.56■□□□□ 0.08
NPAS2Q99743 AL355306.1-201ENST00000415580 579 ntBASIC15.56■□□□□ 0.08
NPAS2Q99743 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS2Q99743 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS2Q99743 AC027796.2-201ENST00000575326 344 ntBASIC15.56■□□□□ 0.08
NPAS2Q99743 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS2Q99743 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NPAS2Q99743 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS2Q99743 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS2Q99743 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS2Q99743 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 AC090616.6-203ENST00000579186 1945 ntBASIC15.56■□□□□ 0.08
NPAS2Q99743 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS2Q99743 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS2Q99743 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NPAS2Q99743 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS2Q99743 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
NPAS2Q99743 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 AC092127.1-201ENST00000567093 3455 ntBASIC15.55■□□□□ 0.08
NPAS2Q99743 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS2Q99743 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 AL139400.1-201ENST00000366220 510 ntBASIC15.55■□□□□ 0.08
NPAS2Q99743 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS2Q99743 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS2Q99743 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS2Q99743 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS2Q99743 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPAS2Q99743 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms