Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC10.54□□□□□ -0.72
LITAFQ99732 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.54□□□□□ -0.72
LITAFQ99732 GPX1P2-201ENST00000429271 606 ntBASIC10.54□□□□□ -0.72
LITAFQ99732 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 AC015802.1-201ENST00000588104 1449 ntBASIC10.54□□□□□ -0.72
LITAFQ99732 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LITAFQ99732 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 AC012569.1-201ENST00000591191 1524 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
LITAFQ99732 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LITAFQ99732 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LITAFQ99732 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LITAFQ99732 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
LITAFQ99732 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.53□□□□□ -0.72
LITAFQ99732 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
LITAFQ99732 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 CHCHD2P8-201ENST00000429873 447 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 KRT17P6-201ENST00000453795 1220 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.53□□□□□ -0.72
LITAFQ99732 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC10.53□□□□□ -0.72
LITAFQ99732 MIR4497-201ENST00000583208 89 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 Z69720.1-201ENST00000601483 472 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 NDUFV2-AS1-203ENST00000608008 779 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 AL805961.1-202ENST00000641562 540 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms