Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 TREML5P-201ENST00000421694 576 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AC027369.6-201ENST00000525520 931 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AC010336.2-201ENST00000564226 506 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AL158211.3-201ENST00000607385 239 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 GPALPP1-207ENST00000611650 899 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 LINC00554-201ENST00000564841 3011 ntBASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 RN7SL618P-201ENST00000477850 296 ntBASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC097493.3-201ENST00000509725 367 ntBASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG4P5Q96PW8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms