Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC068418.2-201ENST00000577309 3703 ntBASIC18.39■□□□□ 0.53
PGBD1Q96JS3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 AL691432.1-201ENST00000596308 1422 ntBASIC18.39■□□□□ 0.53
PGBD1Q96JS3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 AC018892.3-201ENST00000623986 2499 ntBASIC18.39■□□□□ 0.53
PGBD1Q96JS3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.38■□□□□ 0.53
PGBD1Q96JS3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 BNIP3P1-202ENST00000550043 1585 ntBASIC18.38■□□□□ 0.53
PGBD1Q96JS3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD1Q96JS3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 BASP1P1-201ENST00000430708 665 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AC241585.1-201ENST00000433527 519 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AL512361.1-201ENST00000554200 418 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AC026979.3-201ENST00000607315 403 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AP001282.1-201ENST00000531301 1499 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AC087481.3-201ENST00000602886 1894 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 AC112693.3-201ENST00000624819 1983 ntBASIC18.37■□□□□ 0.53
PGBD1Q96JS3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD1Q96JS3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms