Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SHDQ96IW2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.83■□□□□ 0.12
SHDQ96IW2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SHDQ96IW2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.83■□□□□ 0.12
SHDQ96IW2 AC138649.2-201ENST00000615886 705 ntBASIC15.83■□□□□ 0.12
SHDQ96IW2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.83■□□□□ 0.12
SHDQ96IW2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.83■□□□□ 0.12
SHDQ96IW2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SHDQ96IW2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.83■□□□□ 0.12
SHDQ96IW2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.83■□□□□ 0.12
SHDQ96IW2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.83■□□□□ 0.12
SHDQ96IW2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SHDQ96IW2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SHDQ96IW2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SHDQ96IW2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHDQ96IW2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHDQ96IW2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHDQ96IW2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SHDQ96IW2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.82■□□□□ 0.12
SHDQ96IW2 CNN2P10-201ENST00000443067 918 ntBASIC15.82■□□□□ 0.12
SHDQ96IW2 TMEM198B-204ENST00000484016 896 ntBASIC15.82■□□□□ 0.12
SHDQ96IW2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SHDQ96IW2 COX5BP1-201ENST00000507622 393 ntBASIC15.82■□□□□ 0.12
SHDQ96IW2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.82■□□□□ 0.12
SHDQ96IW2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.82■□□□□ 0.12
SHDQ96IW2 AC244157.2-201ENST00000616239 1006 ntBASIC15.82■□□□□ 0.12
SHDQ96IW2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SHDQ96IW2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.82■□□□□ 0.12
SHDQ96IW2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.82■□□□□ 0.12
SHDQ96IW2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.82■□□□□ 0.12
SHDQ96IW2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHDQ96IW2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHDQ96IW2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SHDQ96IW2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
SHDQ96IW2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
SHDQ96IW2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SHDQ96IW2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHDQ96IW2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SHDQ96IW2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.81■□□□□ 0.12
SHDQ96IW2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.81■□□□□ 0.12
SHDQ96IW2 HSPB1P2-201ENST00000448722 546 ntBASIC15.81■□□□□ 0.12
SHDQ96IW2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.81■□□□□ 0.12
SHDQ96IW2 AC245884.6-201ENST00000515672 1067 ntBASIC15.81■□□□□ 0.12
SHDQ96IW2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.81■□□□□ 0.12
SHDQ96IW2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.81■□□□□ 0.12
SHDQ96IW2 MIR4722-201ENST00000578292 60 ntBASIC15.81■□□□□ 0.12
SHDQ96IW2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.81■□□□□ 0.12
SHDQ96IW2 AC091812.3-201ENST00000621362 345 ntBASIC15.81■□□□□ 0.12
SHDQ96IW2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
SHDQ96IW2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHDQ96IW2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SHDQ96IW2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SHDQ96IW2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHDQ96IW2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SHDQ96IW2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.8■□□□□ 0.12
SHDQ96IW2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHDQ96IW2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms