Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AP003680.1-201ENST00000598970 3660 ntBASIC16.33■□□□□ 0.2
HDAC11Q96DB2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 AL139400.1-201ENST00000366220 510 ntBASIC16.33■□□□□ 0.2
HDAC11Q96DB2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC11Q96DB2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 AZGP1P1-201ENST00000411909 902 ntBASIC16.32■□□□□ 0.2
HDAC11Q96DB2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 HNRNPUP1-201ENST00000554987 333 ntBASIC16.32■□□□□ 0.2
HDAC11Q96DB2 MIR4313-201ENST00000580760 101 ntBASIC16.32■□□□□ 0.2
HDAC11Q96DB2 AP001160.2-201ENST00000596071 487 ntBASIC16.32■□□□□ 0.2
HDAC11Q96DB2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC11Q96DB2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 KRT8P12-202ENST00000472924 1397 ntBASIC16.31■□□□□ 0.2
HDAC11Q96DB2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 FO393414.2-201ENST00000405153 598 ntBASIC16.31■□□□□ 0.2
HDAC11Q96DB2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 MTND6P24-201ENST00000440466 518 ntBASIC16.31■□□□□ 0.2
HDAC11Q96DB2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 AC015911.4-201ENST00000588022 1070 ntBASIC16.31■□□□□ 0.2
HDAC11Q96DB2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms