Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 PRAL-201ENST00000624952 3286 ntBASIC16.13■□□□□ 0.17
PTCD2Q8WV60 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.13■□□□□ 0.17
PTCD2Q8WV60 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCD2Q8WV60 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 AC093214.1-201ENST00000511688 1107 ntBASIC16.12■□□□□ 0.17
PTCD2Q8WV60 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 AC140878.1-201ENST00000565277 250 ntBASIC16.12■□□□□ 0.17
PTCD2Q8WV60 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 AC126177.1-201ENST00000547829 2218 ntBASIC16.12■□□□□ 0.17
PTCD2Q8WV60 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTCD2Q8WV60 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 REXO1L1P-202ENST00000608646 1974 ntBASIC16.11■□□□□ 0.17
PTCD2Q8WV60 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC007041.1-201ENST00000438989 1155 ntBASIC16.11■□□□□ 0.17
PTCD2Q8WV60 UGT1A2P-201ENST00000454886 866 ntBASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC097493.3-201ENST00000509725 367 ntBASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 AC023824.1-201ENST00000562945 2975 ntBASIC16.11■□□□□ 0.17
PTCD2Q8WV60 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 TMBIM7P-203ENST00000641617 1718 ntBASIC16.11■□□□□ 0.17
PTCD2Q8WV60 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCD2Q8WV60 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.1■□□□□ 0.17
PTCD2Q8WV60 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms