Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP001505.2-201ENST00000616815 443 ntBASIC18.92■□□□□ 0.62
SNED1Q8TER0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 LTB4R2-202ENST00000528054 3092 ntBASIC18.92■□□□□ 0.62
SNED1Q8TER0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 POM121L8P-201ENST00000417732 1281 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 POM121L9P-203ENST00000441984 1285 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AL645939.5-201ENST00000606834 243 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC138649.2-201ENST00000615886 705 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC104457.1-201ENST00000401024 814 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 EIF3FP3-201ENST00000434851 1086 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC022217.1-201ENST00000521069 738 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AC018635.2-201ENST00000608625 364 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 ENPP7P14-201ENST00000621765 1040 ntBASIC18.91■□□□□ 0.62
SNED1Q8TER0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNED1Q8TER0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SNED1Q8TER0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 PCDHA14-201ENST00000506751 2298 ntBASIC18.9■□□□□ 0.62
SNED1Q8TER0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 AC022188.1-201ENST00000620960 1664 ntBASIC18.9■□□□□ 0.62
SNED1Q8TER0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.9■□□□□ 0.62
SNED1Q8TER0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 MTHFR-217ENST00000641820 1569 ntBASIC18.9■□□□□ 0.62
SNED1Q8TER0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNED1Q8TER0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.9■□□□□ 0.62
SNED1Q8TER0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms