Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.06■□□□□ 0.32
HERC6Q8IVU3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC6Q8IVU3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 REXO1L8P-201ENST00000604378 1897 ntBASIC17.05■□□□□ 0.32
HERC6Q8IVU3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 ACKR1-201ENST00000368121 1240 ntBASIC17.05■□□□□ 0.32
HERC6Q8IVU3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 Z93015.1-201ENST00000451718 390 ntBASIC17.05■□□□□ 0.32
HERC6Q8IVU3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 AC022137.2-201ENST00000503482 481 ntBASIC17.05■□□□□ 0.32
HERC6Q8IVU3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
HERC6Q8IVU3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.04■□□□□ 0.32
HERC6Q8IVU3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.03■□□□□ 0.32
HERC6Q8IVU3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms