Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 AC005829.1-201ENST00000570002 483 ntBASIC14.17□□□□□ -0.14
LRRC28Q86X40 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 C20orf181-201ENST00000623918 480 ntBASIC14.17□□□□□ -0.14
LRRC28Q86X40 AL645728.2-201ENST00000641974 660 ntBASIC14.17□□□□□ -0.14
LRRC28Q86X40 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 MYO15B-237ENST00000642007 4893 ntBASIC14.17□□□□□ -0.14
LRRC28Q86X40 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC28Q86X40 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC28Q86X40 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 MIR4515-201ENST00000584082 81 ntBASIC14.16□□□□□ -0.14
LRRC28Q86X40 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC28Q86X40 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC28Q86X40 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AL353732.1-201ENST00000569618 1459 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms