Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 STK33P1-201ENST00000423835 1218 ntBASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 BCRP1-201ENST00000444246 691 ntBASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 INGX-202ENST00000489074 768 ntBASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 AC004890.2-204ENST00000481968 304 ntBASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 MIR4313-201ENST00000580760 101 ntBASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms