Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 AL078644.1-201ENST00000609881 752 ntBASIC14.71□□□□□ -0.05
TUBA1AQ71U36 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 AL390755.1-201ENST00000623716 2027 ntBASIC14.71□□□□□ -0.05
TUBA1AQ71U36 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1AQ71U36 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TUBA1AQ71U36 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TUBA1AQ71U36 AC012569.1-201ENST00000591191 1524 ntBASIC14.71□□□□□ -0.06
TUBA1AQ71U36 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TUBA1AQ71U36 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.71□□□□□ -0.06
TUBA1AQ71U36 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.71□□□□□ -0.06
TUBA1AQ71U36 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TUBA1AQ71U36 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AL512652.2-201ENST00000625156 1716 ntBASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 YBX2P1-201ENST00000394192 760 ntBASIC14.7□□□□□ -0.06
TUBA1AQ71U36 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 PDPK2P-202ENST00000562415 1191 ntBASIC14.7□□□□□ -0.06
TUBA1AQ71U36 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AC091167.2-201ENST00000579581 588 ntBASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AC023511.2-201ENST00000618803 211 ntBASIC14.7□□□□□ -0.06
TUBA1AQ71U36 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1AQ71U36 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 AC005252.3-201ENST00000623855 2258 ntBASIC14.69□□□□□ -0.06
TUBA1AQ71U36 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.69□□□□□ -0.06
TUBA1AQ71U36 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 HMGA1P7-201ENST00000406908 502 ntBASIC14.69□□□□□ -0.06
TUBA1AQ71U36 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBA1AQ71U36 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms