Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC38Q5VT99 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC38Q5VT99 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRRC38Q5VT99 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC38Q5VT99 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRC38Q5VT99 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 TSPY26P-202ENST00000565928 3884 ntBASIC16.41■□□□□ 0.22
LRRC38Q5VT99 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 AL079307.3-201ENST00000556114 283 ntBASIC16.41■□□□□ 0.22
LRRC38Q5VT99 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 TCAF2P1-201ENST00000291129 2421 ntBASIC16.41■□□□□ 0.22
LRRC38Q5VT99 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC38Q5VT99 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AC211486.1-202ENST00000416371 468 ntBASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AC254562.1-201ENST00000417586 456 ntBASIC16.4■□□□□ 0.22
LRRC38Q5VT99 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 TARDBPP1-201ENST00000442013 1203 ntBASIC16.4■□□□□ 0.22
LRRC38Q5VT99 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AC211476.1-201ENST00000503899 468 ntBASIC16.4■□□□□ 0.22
LRRC38Q5VT99 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 MIR4453-201ENST00000584019 89 ntBASIC16.4■□□□□ 0.22
LRRC38Q5VT99 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 AC148477.4-201ENST00000613430 1793 ntBASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRC38Q5VT99 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.39■□□□□ 0.22
LRRC38Q5VT99 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRC38Q5VT99 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRC38Q5VT99 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
LRRC38Q5VT99 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 AC099063.4-201ENST00000641099 1602 ntBASIC16.39■□□□□ 0.21
LRRC38Q5VT99 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms