Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 ANKRD30BP2-201ENST00000435744 1610 ntBASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 GGCT-203ENST00000409144 836 ntTSL 2 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 AC024909.3-201ENST00000611513 2257 ntBASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RPS15-201ENST00000233609 534 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RPS15-205ENST00000586686 562 ntTSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RPS15-208ENST00000591804 711 ntTSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 AC091544.8-201ENST00000619490 361 ntBASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPAQ5VT25 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 TMEM198B-204ENST00000484016 896 ntBASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC23.34■■□□□ 1.33
CDC42BPAQ5VT25 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 RPS2P36-201ENST00000456516 831 ntBASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 HCG18-245ENST00000602550 559 ntTSL 4 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDC42BPAQ5VT25 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 MIR33B-201ENST00000385104 96 ntBASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 RN7SL11P-201ENST00000471305 293 ntBASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 NUP210P1-202ENST00000504322 710 ntBASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms