Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 AC012640.2-201ENST00000561606 901 ntBASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 AL359258.3-201ENST00000622910 2331 ntBASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AC023024.2-201ENST00000623561 1993 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 RPS2P28-201ENST00000314255 741 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AL645939.2-201ENST00000427340 991 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 HCG4P8-203ENST00000443049 980 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 PRYP6-201ENST00000514804 343 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 REXO1L1P-202ENST00000608646 1974 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms