Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AC084364.1-201ENST00000551967 1556 ntBASIC18.78■□□□□ 0.6
PDS5AQ29RF7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AC093525.8-201ENST00000624099 1342 ntBASIC18.78■□□□□ 0.6
PDS5AQ29RF7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 RPL7P3-201ENST00000441388 714 ntBASIC18.77■□□□□ 0.6
PDS5AQ29RF7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 PRSS30P-206ENST00000641773 873 ntBASIC18.77■□□□□ 0.6
PDS5AQ29RF7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDS5AQ29RF7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDS5AQ29RF7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.77■□□□□ 0.59
PDS5AQ29RF7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.77■□□□□ 0.59
PDS5AQ29RF7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
PDS5AQ29RF7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 FO681548.1-201ENST00000455617 1132 ntBASIC18.76■□□□□ 0.59
PDS5AQ29RF7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 AC127383.1-201ENST00000444697 1800 ntBASIC18.76■□□□□ 0.59
PDS5AQ29RF7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 DOC2GP-204ENST00000639052 2548 ntBASIC18.76■□□□□ 0.59
PDS5AQ29RF7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDS5AQ29RF7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 KLF2P4-201ENST00000451959 1225 ntBASIC18.75■□□□□ 0.59
PDS5AQ29RF7 CTBP2P5-201ENST00000454986 1264 ntBASIC18.75■□□□□ 0.59
PDS5AQ29RF7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 AP001582.1-201ENST00000525856 295 ntBASIC18.75■□□□□ 0.59
PDS5AQ29RF7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 KRT90P-201ENST00000549264 1064 ntBASIC18.75■□□□□ 0.59
PDS5AQ29RF7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms