Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IRX4P78413 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 ATP5G2P4-201ENST00000442175 420 ntBASIC16.57■□□□□ 0.24
IRX4P78413 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.57■□□□□ 0.24
IRX4P78413 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.57■□□□□ 0.24
IRX4P78413 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.57■□□□□ 0.24
IRX4P78413 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.57■□□□□ 0.24
IRX4P78413 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.57■□□□□ 0.24
IRX4P78413 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.57■□□□□ 0.24
IRX4P78413 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.57■□□□□ 0.24
IRX4P78413 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 AC006449.6-201ENST00000612330 2296 ntBASIC16.57■□□□□ 0.24
IRX4P78413 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
IRX4P78413 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
IRX4P78413 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.56■□□□□ 0.24
IRX4P78413 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.56■□□□□ 0.24
IRX4P78413 AL353732.1-201ENST00000569618 1459 ntBASIC16.56■□□□□ 0.24
IRX4P78413 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.56■□□□□ 0.24
IRX4P78413 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 TOP3BP1-201ENST00000420768 1380 ntBASIC16.56■□□□□ 0.24
IRX4P78413 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.56■□□□□ 0.24
IRX4P78413 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
IRX4P78413 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.56■□□□□ 0.24
IRX4P78413 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.56■□□□□ 0.24
IRX4P78413 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.56■□□□□ 0.24
IRX4P78413 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.56■□□□□ 0.24
IRX4P78413 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.56■□□□□ 0.24
IRX4P78413 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.56■□□□□ 0.24
IRX4P78413 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
IRX4P78413 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
IRX4P78413 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 CU639417.3-201ENST00000624240 1404 ntBASIC16.55■□□□□ 0.24
IRX4P78413 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 REXO1L8P-201ENST00000604378 1897 ntBASIC16.55■□□□□ 0.24
IRX4P78413 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.55■□□□□ 0.24
IRX4P78413 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IRX4P78413 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.55■□□□□ 0.24
IRX4P78413 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.55■□□□□ 0.24
IRX4P78413 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IRX4P78413 SPTLC1P1-201ENST00000447199 261 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms