Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 AL353705.2-201ENST00000428243 662 ntBASIC16.04■□□□□ 0.16
PRAMEP78395 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PRAMEP78395 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
PRAMEP78395 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PRAMEP78395 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEP78395 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEP78395 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEP78395 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEP78395 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEP78395 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEP78395 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 LINC02228-204ENST00000642115 2962 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 CICP13-201ENST00000422015 2789 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRAMEP78395 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 FAM58DP-201ENST00000428076 619 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEP78395 RBPMS2P1-201ENST00000437762 623 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEP78395 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.03■□□□□ 0.16
PRAMEP78395 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PRAMEP78395 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEP78395 REXO1L1P-202ENST00000608646 1974 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 CYP4F24P-201ENST00000586049 1580 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 PCDHA3-202ENST00000532566 4594 ntBASIC16.03■□□□□ 0.16
PRAMEP78395 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRAMEP78395 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEP78395 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEP78395 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEP78395 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.02■□□□□ 0.16
PRAMEP78395 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PRAMEP78395 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEP78395 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEP78395 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEP78395 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEP78395 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEP78395 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEP78395 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEP78395 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEP78395 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PRAMEP78395 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.02■□□□□ 0.16
PRAMEP78395 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEP78395 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.02■□□□□ 0.16
PRAMEP78395 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PRAMEP78395 AC093520.2-201ENST00000561830 333 ntBASIC16.02■□□□□ 0.16
PRAMEP78395 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.02■□□□□ 0.16
PRAMEP78395 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEP78395 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEP78395 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEP78395 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEP78395 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEP78395 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEP78395 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PRAMEP78395 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEP78395 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEP78395 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms