Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.42■□□□□ 0.06
AP1S2P56377 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.42■□□□□ 0.06
AP1S2P56377 KLF2P3-201ENST00000451977 1087 ntBASIC15.42■□□□□ 0.06
AP1S2P56377 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.42■□□□□ 0.06
AP1S2P56377 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 AC125807.1-201ENST00000483097 614 ntBASIC15.42■□□□□ 0.06
AP1S2P56377 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.42■□□□□ 0.06
AP1S2P56377 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.42■□□□□ 0.06
AP1S2P56377 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.42■□□□□ 0.06
AP1S2P56377 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.42■□□□□ 0.06
AP1S2P56377 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 AC090616.6-203ENST00000579186 1945 ntBASIC15.42■□□□□ 0.06
AP1S2P56377 AC063926.3-201ENST00000624734 5658 ntBASIC15.42■□□□□ 0.06
AP1S2P56377 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S2P56377 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
AP1S2P56377 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S2P56377 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 AL607033.1-201ENST00000623900 1599 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
AP1S2P56377 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 AC127383.1-201ENST00000444697 1800 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
AP1S2P56377 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 AL645939.2-201ENST00000427340 991 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 AC140878.1-201ENST00000565277 250 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 AC051619.7-201ENST00000568314 623 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.41■□□□□ 0.06
AP1S2P56377 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 AL033527.5-202ENST00000641632 1098 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.41■□□□□ 0.06
AP1S2P56377 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S2P56377 AC092384.3-202ENST00000564646 2873 ntBASIC15.41■□□□□ 0.06
AP1S2P56377 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S2P56377 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S2P56377 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S2P56377 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S2P56377 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP1S2P56377 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S2P56377 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP1S2P56377 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP1S2P56377 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S2P56377 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S2P56377 RPL37AP1-201ENST00000412502 279 ntBASIC15.4■□□□□ 0.06
AP1S2P56377 AC107890.1-201ENST00000422478 521 ntBASIC15.4■□□□□ 0.06
AP1S2P56377 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms