Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL133267.1-201ENST00000398220 340 ntBASIC14.13□□□□□ -0.15
GFRA1P56159 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 AL442647.2-201ENST00000429864 857 ntBASIC14.13□□□□□ -0.15
GFRA1P56159 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.13□□□□□ -0.15
GFRA1P56159 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.13□□□□□ -0.15
GFRA1P56159 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.13□□□□□ -0.15
GFRA1P56159 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 BRI3BPP1-201ENST00000594224 787 ntBASIC14.13□□□□□ -0.15
GFRA1P56159 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 AL365203.3-201ENST00000609742 2057 ntBASIC14.12□□□□□ -0.15
GFRA1P56159 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 RN7SL752P-201ENST00000463779 287 ntBASIC14.12□□□□□ -0.15
GFRA1P56159 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.12□□□□□ -0.15
GFRA1P56159 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.12□□□□□ -0.15
GFRA1P56159 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 AC015910.1-201ENST00000579400 975 ntBASIC14.12□□□□□ -0.15
GFRA1P56159 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 WFDC1-204ENST00000613603 549 ntBASIC14.12□□□□□ -0.15
GFRA1P56159 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.12□□□□□ -0.15
GFRA1P56159 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GFRA1P56159 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GFRA1P56159 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.12□□□□□ -0.15
GFRA1P56159 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.11□□□□□ -0.15
GFRA1P56159 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
GFRA1P56159 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.11□□□□□ -0.15
GFRA1P56159 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.11□□□□□ -0.15
GFRA1P56159 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 AC239800.4-201ENST00000603712 296 ntBASIC14.11□□□□□ -0.15
GFRA1P56159 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
GFRA1P56159 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms