Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH11P55287 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH11P55287 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 RNU1-129P-201ENST00000384064 167 ntBASIC14.58□□□□□ -0.08
CDH11P55287 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH11P55287 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.58□□□□□ -0.08
CDH11P55287 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 U1.21-201ENST00000580816 167 ntBASIC14.58□□□□□ -0.08
CDH11P55287 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 AL355385.1-201ENST00000606123 409 ntBASIC14.58□□□□□ -0.08
CDH11P55287 AL031055.1-201ENST00000606362 631 ntBASIC14.58□□□□□ -0.08
CDH11P55287 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH11P55287 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH11P55287 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH11P55287 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH11P55287 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDH11P55287 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH11P55287 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH11P55287 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH11P55287 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH11P55287 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 TIMM8BP1-201ENST00000452384 211 ntBASIC14.57□□□□□ -0.08
CDH11P55287 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH11P55287 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH11P55287 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.57□□□□□ -0.08
CDH11P55287 MIR4515-201ENST00000584082 81 ntBASIC14.57□□□□□ -0.08
CDH11P55287 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH11P55287 AC027612.4-201ENST00000605371 583 ntBASIC14.57□□□□□ -0.08
CDH11P55287 AL513210.1-201ENST00000629608 234 ntBASIC14.57□□□□□ -0.08
CDH11P55287 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDH11P55287 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH11P55287 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH11P55287 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH11P55287 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms