Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 AC000095.1-201ENST00000603208 874 ntBASIC17.26■□□□□ 0.35
NCKAP1LP55160 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 DFFBP1-201ENST00000433250 979 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 TERF1P3-201ENST00000505638 1227 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 AL132655.2-201ENST00000596276 594 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 AC004233.3-201ENST00000607794 1269 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 AC099568.2-201ENST00000609194 695 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 SLC7A15P-201ENST00000424028 1363 ntBASIC17.25■□□□□ 0.35
NCKAP1LP55160 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCKAP1LP55160 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.25■□□□□ 0.35
NCKAP1LP55160 CLK3P2-201ENST00000427566 1453 ntBASIC17.24■□□□□ 0.35
NCKAP1LP55160 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.24■□□□□ 0.35
NCKAP1LP55160 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 AC105917.1-201ENST00000506637 2539 ntBASIC17.24■□□□□ 0.35
NCKAP1LP55160 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 MEP1AP4-201ENST00000423244 1087 ntBASIC17.24■□□□□ 0.35
NCKAP1LP55160 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 AC055876.2-201ENST00000531834 546 ntBASIC17.24■□□□□ 0.35
NCKAP1LP55160 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 RRP7BP-205ENST00000566851 833 ntBASIC17.24■□□□□ 0.35
NCKAP1LP55160 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms