Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 MIR648-201ENST00000385046 94 ntBASIC16.99■□□□□ 0.31
VCPP55072 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.99■□□□□ 0.31
VCPP55072 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VCPP55072 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.99■□□□□ 0.31
VCPP55072 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
VCPP55072 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
VCPP55072 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VCPP55072 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.99■□□□□ 0.31
VCPP55072 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VCPP55072 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VCPP55072 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.99■□□□□ 0.31
VCPP55072 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.99■□□□□ 0.31
VCPP55072 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VCPP55072 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCPP55072 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.98■□□□□ 0.31
VCPP55072 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 ACTBP11-201ENST00000436287 1126 ntBASIC16.98■□□□□ 0.31
VCPP55072 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.98■□□□□ 0.31
VCPP55072 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.98■□□□□ 0.31
VCPP55072 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.98■□□□□ 0.31
VCPP55072 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VCPP55072 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.98■□□□□ 0.31
VCPP55072 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.98■□□□□ 0.31
VCPP55072 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.98■□□□□ 0.31
VCPP55072 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 AC069224.1-201ENST00000566372 1715 ntBASIC16.98■□□□□ 0.31
VCPP55072 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 CETN4P-206ENST00000642099 2168 ntBASIC16.98■□□□□ 0.31
VCPP55072 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VCPP55072 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCPP55072 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
VCPP55072 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.97■□□□□ 0.31
VCPP55072 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.97■□□□□ 0.31
VCPP55072 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.97■□□□□ 0.31
VCPP55072 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VCPP55072 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VCPP55072 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VCPP55072 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.97■□□□□ 0.31
VCPP55072 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.97■□□□□ 0.31
VCPP55072 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.97■□□□□ 0.31
VCPP55072 MTND6P24-201ENST00000440466 518 ntBASIC16.97■□□□□ 0.31
VCPP55072 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.97■□□□□ 0.31
VCPP55072 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.97■□□□□ 0.31
VCPP55072 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.97■□□□□ 0.31
VCPP55072 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.97■□□□□ 0.31
VCPP55072 RN7SL219P-201ENST00000582872 296 ntBASIC16.97■□□□□ 0.31
VCPP55072 AL589739.1-201ENST00000607720 493 ntBASIC16.97■□□□□ 0.31
VCPP55072 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCPP55072 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.97■□□□□ 0.31
VCPP55072 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.97■□□□□ 0.31
VCPP55072 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms