Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC3P51654 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 RN7SL837P-201ENST00000463010 287 ntBASIC17.44■□□□□ 0.38
GPC3P51654 RN7SL399P-201ENST00000471648 279 ntBASIC17.44■□□□□ 0.38
GPC3P51654 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC3P51654 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 AC097359.3-201ENST00000603982 1210 ntBASIC17.44■□□□□ 0.38
GPC3P51654 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.43■□□□□ 0.38
GPC3P51654 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GPC3P51654 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GPC3P51654 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 TOMM22P5-201ENST00000416399 439 ntBASIC17.43■□□□□ 0.38
GPC3P51654 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.43■□□□□ 0.38
GPC3P51654 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 SLED1-202ENST00000512051 380 ntBASIC17.43■□□□□ 0.38
GPC3P51654 AC104596.2-201ENST00000512793 793 ntBASIC17.43■□□□□ 0.38
GPC3P51654 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.43■□□□□ 0.38
GPC3P51654 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
GPC3P51654 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
GPC3P51654 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 AC036164.1-201ENST00000570544 333 ntBASIC17.43■□□□□ 0.38
GPC3P51654 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 AC008894.3-201ENST00000624324 3103 ntBASIC17.43■□□□□ 0.38
GPC3P51654 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
GPC3P51654 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC3P51654 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC3P51654 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC3P51654 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC3P51654 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 AC092552.1-201ENST00000547243 906 ntBASIC17.42■□□□□ 0.38
GPC3P51654 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.42■□□□□ 0.38
GPC3P51654 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC3P51654 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC3P51654 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 AC018892.3-201ENST00000623986 2499 ntBASIC17.42■□□□□ 0.38
GPC3P51654 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms