Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.98□□□□□ -0.01
KNTC1P50748 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.98□□□□□ -0.01
KNTC1P50748 AC026410.3-201ENST00000514280 936 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 AC078819.1-201ENST00000547454 765 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 AC012085.1-201ENST00000548270 765 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.98□□□□□ -0.01
KNTC1P50748 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 AC011676.5-201ENST00000624864 2660 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 FNTAP2-201ENST00000430308 634 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 CHMP4BP1-201ENST00000556017 588 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.98□□□□□ -0.01
KNTC1P50748 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.98□□□□□ -0.01
KNTC1P50748 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
KNTC1P50748 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 AL645608.8-201ENST00000606034 2086 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 NOC2LP2-201ENST00000407594 1944 ntBASIC14.98□□□□□ -0.01
KNTC1P50748 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
KNTC1P50748 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.98□□□□□ -0.01
KNTC1P50748 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KNTC1P50748 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.97□□□□□ -0.01
KNTC1P50748 KRT18P64-201ENST00000434946 1219 ntBASIC14.97□□□□□ -0.01
KNTC1P50748 RPS2P36-201ENST00000456516 831 ntBASIC14.97□□□□□ -0.01
KNTC1P50748 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.97□□□□□ -0.01
KNTC1P50748 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.97□□□□□ -0.01
KNTC1P50748 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.97□□□□□ -0.01
KNTC1P50748 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.97□□□□□ -0.01
KNTC1P50748 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KNTC1P50748 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
KNTC1P50748 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 AL133267.1-201ENST00000398220 340 ntBASIC14.97□□□□□ -0.01
KNTC1P50748 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.97□□□□□ -0.01
KNTC1P50748 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.97□□□□□ -0.01
KNTC1P50748 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.97□□□□□ -0.01
KNTC1P50748 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.97□□□□□ -0.01
KNTC1P50748 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KNTC1P50748 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KNTC1P50748 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KNTC1P50748 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms