Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.38■□□□□ 0.37
CPT1AP50416 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPT1AP50416 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 FAM197Y7-201ENST00000432892 766 ntBASIC17.38■□□□□ 0.37
CPT1AP50416 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.38■□□□□ 0.37
CPT1AP50416 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.38■□□□□ 0.37
CPT1AP50416 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.38■□□□□ 0.37
CPT1AP50416 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.38■□□□□ 0.37
CPT1AP50416 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.38■□□□□ 0.37
CPT1AP50416 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CPT1AP50416 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.38■□□□□ 0.37
CPT1AP50416 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPT1AP50416 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.37■□□□□ 0.37
CPT1AP50416 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.37■□□□□ 0.37
CPT1AP50416 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
CPT1AP50416 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.37■□□□□ 0.37
CPT1AP50416 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.37■□□□□ 0.37
CPT1AP50416 FAM86HP-204ENST00000513466 959 ntBASIC17.37■□□□□ 0.37
CPT1AP50416 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.37■□□□□ 0.37
CPT1AP50416 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CPT1AP50416 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.37■□□□□ 0.37
CPT1AP50416 MIR4313-201ENST00000580760 101 ntBASIC17.37■□□□□ 0.37
CPT1AP50416 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.37■□□□□ 0.37
CPT1AP50416 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.37■□□□□ 0.37
CPT1AP50416 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.37■□□□□ 0.37
CPT1AP50416 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.37■□□□□ 0.37
CPT1AP50416 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.37■□□□□ 0.37
CPT1AP50416 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.37■□□□□ 0.37
CPT1AP50416 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CPT1AP50416 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CPT1AP50416 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPT1AP50416 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CPT1AP50416 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPT1AP50416 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CPT1AP50416 MIR1247-201ENST00000408206 136 ntBASIC17.36■□□□□ 0.37
CPT1AP50416 AC245100.3-201ENST00000441281 285 ntBASIC17.36■□□□□ 0.37
CPT1AP50416 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.36■□□□□ 0.37
CPT1AP50416 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.36■□□□□ 0.37
CPT1AP50416 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.36■□□□□ 0.37
CPT1AP50416 AC078819.1-201ENST00000547454 765 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms