Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TM4SF4P48230 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TM4SF4P48230 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TM4SF4P48230 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF4P48230 CTBP2P4-201ENST00000513884 920 ntBASIC17.67■□□□□ 0.42
TM4SF4P48230 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF4P48230 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.67■□□□□ 0.42
TM4SF4P48230 AL160314.3-201ENST00000556041 767 ntBASIC17.67■□□□□ 0.42
TM4SF4P48230 DNM1P30-201ENST00000563586 452 ntBASIC17.67■□□□□ 0.42
TM4SF4P48230 SNORD3B-2-202ENST00000571722 791 ntBASIC17.67■□□□□ 0.42
TM4SF4P48230 MIR4754-201ENST00000582477 89 ntBASIC17.67■□□□□ 0.42
TM4SF4P48230 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.67■□□□□ 0.42
TM4SF4P48230 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TM4SF4P48230 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF4P48230 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF4P48230 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.67■□□□□ 0.42
TM4SF4P48230 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TM4SF4P48230 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
TM4SF4P48230 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TM4SF4P48230 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF4P48230 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
TM4SF4P48230 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.66■□□□□ 0.42
TM4SF4P48230 AC011477.6-201ENST00000604980 1927 ntBASIC17.66■□□□□ 0.42
TM4SF4P48230 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
TM4SF4P48230 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
TM4SF4P48230 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF4P48230 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TM4SF4P48230 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 AC022616.1-201ENST00000518688 554 ntBASIC17.66■□□□□ 0.42
TM4SF4P48230 MIR4783-201ENST00000580343 82 ntBASIC17.66■□□□□ 0.42
TM4SF4P48230 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TM4SF4P48230 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.66■□□□□ 0.42
TM4SF4P48230 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.66■□□□□ 0.42
TM4SF4P48230 AC051619.9-201ENST00000623237 597 ntBASIC17.66■□□□□ 0.42
TM4SF4P48230 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF4P48230 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF4P48230 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TM4SF4P48230 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF4P48230 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TM4SF4P48230 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF4P48230 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.65■□□□□ 0.42
TM4SF4P48230 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
TM4SF4P48230 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF4P48230 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TM4SF4P48230 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 AL627231.1-201ENST00000394467 1125 ntBASIC17.65■□□□□ 0.42
TM4SF4P48230 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF4P48230 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC103810.10-201ENST00000606504 343 ntBASIC17.65■□□□□ 0.42
TM4SF4P48230 AC138466.3-201ENST00000619983 221 ntBASIC17.65■□□□□ 0.42
TM4SF4P48230 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF4P48230 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF4P48230 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF4P48230 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF4P48230 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms