Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 AC004987.2-201ENST00000395959 1148 ntBASIC14.28□□□□□ -0.12
ATRXP46100 ACTG1P2-201ENST00000415776 1125 ntBASIC14.28□□□□□ -0.12
ATRXP46100 ACTG1P11-201ENST00000425411 1125 ntBASIC14.28□□□□□ -0.12
ATRXP46100 POM121L9P-203ENST00000441984 1285 ntBASIC14.28□□□□□ -0.12
ATRXP46100 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.28□□□□□ -0.12
ATRXP46100 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 AC004554.1-201ENST00000422830 1468 ntBASIC14.28□□□□□ -0.12
ATRXP46100 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.27□□□□□ -0.12
ATRXP46100 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.27□□□□□ -0.12
ATRXP46100 SLED1-202ENST00000512051 380 ntBASIC14.27□□□□□ -0.12
ATRXP46100 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.27□□□□□ -0.12
ATRXP46100 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
ATRXP46100 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 ECM1P1-201ENST00000604092 1279 ntBASIC14.27□□□□□ -0.12
ATRXP46100 AL353770.1-201ENST00000614915 403 ntBASIC14.27□□□□□ -0.12
ATRXP46100 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ATRXP46100 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
ATRXP46100 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATRXP46100 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.27□□□□□ -0.12
ATRXP46100 LETM1P2-201ENST00000597330 2178 ntBASIC14.27□□□□□ -0.12
ATRXP46100 PCGF3-213ENST00000620529 1899 ntBASIC14.27□□□□□ -0.12
ATRXP46100 LINC02012-201ENST00000608206 1725 ntBASIC14.27□□□□□ -0.12
ATRXP46100 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ATRXP46100 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.27□□□□□ -0.12
ATRXP46100 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.27□□□□□ -0.13
ATRXP46100 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.27□□□□□ -0.13
ATRXP46100 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
ATRXP46100 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 AC007787.1-201ENST00000588095 1583 ntBASIC14.27□□□□□ -0.13
ATRXP46100 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 AL691432.1-201ENST00000596308 1422 ntBASIC14.27□□□□□ -0.13
ATRXP46100 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATRXP46100 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.27□□□□□ -0.13
ATRXP46100 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ATRXP46100 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.26□□□□□ -0.13
ATRXP46100 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ATRXP46100 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 AC006335.1-201ENST00000445200 547 ntBASIC14.26□□□□□ -0.13
ATRXP46100 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.26□□□□□ -0.13
ATRXP46100 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 AC000095.1-201ENST00000603208 874 ntBASIC14.26□□□□□ -0.13
ATRXP46100 AC012313.1-201ENST00000593393 3059 ntBASIC14.26□□□□□ -0.13
ATRXP46100 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 AC007613.1-201ENST00000572811 2597 ntBASIC14.26□□□□□ -0.13
ATRXP46100 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms