Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.07■□□□□ 0.16
HADHAP40939 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 AL035456.1-201ENST00000456064 1369 ntBASIC16.07■□□□□ 0.16
HADHAP40939 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.07■□□□□ 0.16
HADHAP40939 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 LINC00554-201ENST00000564841 3011 ntBASIC16.07■□□□□ 0.16
HADHAP40939 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 AC023157.3-201ENST00000619086 2088 ntBASIC16.06■□□□□ 0.16
HADHAP40939 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HADHAP40939 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.06■□□□□ 0.16
HADHAP40939 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 HLA-J-203ENST00000494367 1087 ntBASIC16.06■□□□□ 0.16
HADHAP40939 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.06■□□□□ 0.16
HADHAP40939 AC003101.2-201ENST00000612557 442 ntBASIC16.06■□□□□ 0.16
HADHAP40939 AC007967.4-201ENST00000614700 386 ntBASIC16.06■□□□□ 0.16
HADHAP40939 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.06■□□□□ 0.16
HADHAP40939 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HADHAP40939 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HADHAP40939 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.06■□□□□ 0.16
HADHAP40939 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 AC087481.3-201ENST00000602886 1894 ntBASIC16.05■□□□□ 0.16
HADHAP40939 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
HADHAP40939 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 CYP4F24P-201ENST00000586049 1580 ntBASIC16.05■□□□□ 0.16
HADHAP40939 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 HYMAI-201ENST00000635591 3347 ntBASIC16.05■□□□□ 0.16
HADHAP40939 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
HADHAP40939 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.05■□□□□ 0.16
HADHAP40939 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.05■□□□□ 0.16
HADHAP40939 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 AC105021.1-202ENST00000570572 669 ntBASIC16.05■□□□□ 0.16
HADHAP40939 LINC00628-201ENST00000628516 1289 ntBASIC16.05■□□□□ 0.16
HADHAP40939 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HADHAP40939 AC092850.2-201ENST00000623821 2697 ntBASIC16.05■□□□□ 0.16
HADHAP40939 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HADHAP40939 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HADHAP40939 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms