Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 AC138969.3-201ENST00000546612 1459 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 AC138932.2-201ENST00000548268 1459 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 AC126755.4-201ENST00000549796 1459 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
GRIK1P39086 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 AC098614.1-201ENST00000368528 745 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.67■□□□□ 0.26
GRIK1P39086 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.67■□□□□ 0.26
GRIK1P39086 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.67■□□□□ 0.26
GRIK1P39086 NME2P1-201ENST00000426182 414 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GRIK1P39086 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.67■□□□□ 0.26
GRIK1P39086 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.67■□□□□ 0.26
GRIK1P39086 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.67■□□□□ 0.26
GRIK1P39086 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.67■□□□□ 0.26
GRIK1P39086 WASH4P-201ENST00000564273 1246 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 RRP7BP-205ENST00000566851 833 ntBASIC16.67■□□□□ 0.26
GRIK1P39086 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GRIK1P39086 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GRIK1P39086 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.67■□□□□ 0.26
GRIK1P39086 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.67■□□□□ 0.26
GRIK1P39086 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.67■□□□□ 0.26
GRIK1P39086 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GRIK1P39086 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.67■□□□□ 0.26
GRIK1P39086 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GRIK1P39086 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 AP006294.1-201ENST00000415407 339 ntBASIC16.66■□□□□ 0.26
GRIK1P39086 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.66■□□□□ 0.26
GRIK1P39086 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 GAPDHP21-201ENST00000450301 1010 ntBASIC16.66■□□□□ 0.26
GRIK1P39086 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.66■□□□□ 0.26
GRIK1P39086 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.66■□□□□ 0.26
GRIK1P39086 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.66■□□□□ 0.26
GRIK1P39086 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 AL158212.4-201ENST00000624062 1286 ntBASIC16.66■□□□□ 0.26
GRIK1P39086 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.66■□□□□ 0.26
GRIK1P39086 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 CLK3P2-201ENST00000427566 1453 ntBASIC16.66■□□□□ 0.26
GRIK1P39086 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
GRIK1P39086 AC024909.3-201ENST00000611513 2257 ntBASIC16.66■□□□□ 0.26
GRIK1P39086 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
GRIK1P39086 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GRIK1P39086 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GRIK1P39086 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 CU639417.3-201ENST00000624240 1404 ntBASIC16.65■□□□□ 0.26
GRIK1P39086 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GRIK1P39086 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GRIK1P39086 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms