Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.75■□□□□ 0.27
PCK1P35558 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCK1P35558 AL627223.1-201ENST00000416693 442 ntBASIC16.75■□□□□ 0.27
PCK1P35558 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.75■□□□□ 0.27
PCK1P35558 AC093520.2-201ENST00000561830 333 ntBASIC16.75■□□□□ 0.27
PCK1P35558 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.75■□□□□ 0.27
PCK1P35558 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
PCK1P35558 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCK1P35558 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
PCK1P35558 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.75■□□□□ 0.27
PCK1P35558 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.75■□□□□ 0.27
PCK1P35558 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.75■□□□□ 0.27
PCK1P35558 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 AL136982.4-201ENST00000437689 1740 ntBASIC16.75■□□□□ 0.27
PCK1P35558 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.75■□□□□ 0.27
PCK1P35558 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
PCK1P35558 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 FAM58DP-201ENST00000428076 619 ntBASIC16.74■□□□□ 0.27
PCK1P35558 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.74■□□□□ 0.27
PCK1P35558 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.74■□□□□ 0.27
PCK1P35558 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.74■□□□□ 0.27
PCK1P35558 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.74■□□□□ 0.27
PCK1P35558 AC004835.2-201ENST00000603762 682 ntBASIC16.74■□□□□ 0.27
PCK1P35558 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.74■□□□□ 0.27
PCK1P35558 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.74■□□□□ 0.27
PCK1P35558 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.74■□□□□ 0.27
PCK1P35558 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.74■□□□□ 0.27
PCK1P35558 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCK1P35558 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PCK1P35558 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCK1P35558 CYP4F24P-201ENST00000586049 1580 ntBASIC16.73■□□□□ 0.27
PCK1P35558 PRAL-201ENST00000624952 3286 ntBASIC16.73■□□□□ 0.27
PCK1P35558 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.73■□□□□ 0.27
PCK1P35558 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCK1P35558 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 KRT18P32-201ENST00000424695 1287 ntBASIC16.73■□□□□ 0.27
PCK1P35558 EEF1DP4-201ENST00000446006 880 ntBASIC16.73■□□□□ 0.27
PCK1P35558 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.73■□□□□ 0.27
PCK1P35558 ALG1L8P-201ENST00000533887 760 ntBASIC16.73■□□□□ 0.27
PCK1P35558 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCK1P35558 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.73■□□□□ 0.27
PCK1P35558 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.73■□□□□ 0.27
PCK1P35558 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.73■□□□□ 0.27
PCK1P35558 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCK1P35558 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.73■□□□□ 0.27
PCK1P35558 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms