Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 AC069224.1-201ENST00000566372 1715 ntBASIC14.35□□□□□ -0.11
GDF1P27539 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.35□□□□□ -0.11
GDF1P27539 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GDF1P27539 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GDF1P27539 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.35□□□□□ -0.11
GDF1P27539 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
GDF1P27539 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.35□□□□□ -0.11
GDF1P27539 RPL13P2-201ENST00000440687 659 ntBASIC14.35□□□□□ -0.11
GDF1P27539 SLED1-202ENST00000512051 380 ntBASIC14.35□□□□□ -0.11
GDF1P27539 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.35□□□□□ -0.11
GDF1P27539 AC123567.1-201ENST00000548294 1261 ntBASIC14.35□□□□□ -0.11
GDF1P27539 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.35□□□□□ -0.11
GDF1P27539 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.35□□□□□ -0.11
GDF1P27539 AL596325.1-201ENST00000563991 1082 ntBASIC14.35□□□□□ -0.11
GDF1P27539 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 AC239800.4-201ENST00000603712 296 ntBASIC14.35□□□□□ -0.11
GDF1P27539 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
GDF1P27539 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
GDF1P27539 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GDF1P27539 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GDF1P27539 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.35□□□□□ -0.11
GDF1P27539 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GDF1P27539 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDF1P27539 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.34□□□□□ -0.11
GDF1P27539 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 AC074338.1-201ENST00000416825 156 ntBASIC14.34□□□□□ -0.11
GDF1P27539 AC136604.1-201ENST00000418535 575 ntBASIC14.34□□□□□ -0.11
GDF1P27539 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.34□□□□□ -0.11
GDF1P27539 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.34□□□□□ -0.11
GDF1P27539 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 MYCLP2-201ENST00000449268 967 ntBASIC14.34□□□□□ -0.11
GDF1P27539 LINC02447-202ENST00000501888 2146 ntBASIC14.34□□□□□ -0.11
GDF1P27539 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 AC104596.2-201ENST00000512793 793 ntBASIC14.34□□□□□ -0.11
GDF1P27539 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
GDF1P27539 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.34□□□□□ -0.11
GDF1P27539 RARRES2P5-201ENST00000564013 466 ntBASIC14.34□□□□□ -0.11
GDF1P27539 AC036164.1-201ENST00000570544 333 ntBASIC14.34□□□□□ -0.11
GDF1P27539 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.34□□□□□ -0.11
GDF1P27539 AC093726.1-201ENST00000608064 963 ntBASIC14.34□□□□□ -0.11
GDF1P27539 AC099568.2-201ENST00000609194 695 ntBASIC14.34□□□□□ -0.11
GDF1P27539 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.34□□□□□ -0.11
GDF1P27539 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 CDC14C-201ENST00000428251 1719 ntBASIC14.34□□□□□ -0.11
GDF1P27539 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.34□□□□□ -0.11
GDF1P27539 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms