Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.31■□□□□ 0.04
CAPN3P20807 CEND1P1-201ENST00000451006 455 ntBASIC15.31■□□□□ 0.04
CAPN3P20807 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.31■□□□□ 0.04
CAPN3P20807 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.31■□□□□ 0.04
CAPN3P20807 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 NORAD-201ENST00000565493 5339 ntBASIC15.31■□□□□ 0.04
CAPN3P20807 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPN3P20807 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN3P20807 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN3P20807 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN3P20807 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN3P20807 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN3P20807 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN3P20807 ALG1L5P-201ENST00000482043 771 ntBASIC15.3■□□□□ 0.04
CAPN3P20807 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 AC190387.1-201ENST00000551683 408 ntBASIC15.3■□□□□ 0.04
CAPN3P20807 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN3P20807 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.3■□□□□ 0.04
CAPN3P20807 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CAPN3P20807 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN3P20807 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 SNX18-202ENST00000343017 3140 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 WASH6P-202ENST00000359512 1437 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 KRT8P44-201ENST00000441609 1350 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 KRT18P2-201ENST00000447938 1258 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 HCG4B-203ENST00000450128 991 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms