Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 TIMM17BP1-201ENST00000545713 516 ntBASIC18.31■□□□□ 0.52
CAPN2P17655 RN7SL190P-201ENST00000582519 257 ntBASIC18.31■□□□□ 0.52
CAPN2P17655 AC010319.3-201ENST00000597028 470 ntBASIC18.31■□□□□ 0.52
CAPN2P17655 AL022328.1-201ENST00000610050 478 ntBASIC18.31■□□□□ 0.52
CAPN2P17655 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN2P17655 GPR182-203ENST00000622922 591 ntBASIC18.31■□□□□ 0.52
CAPN2P17655 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN2P17655 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN2P17655 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CAPN2P17655 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN2P17655 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN2P17655 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAPN2P17655 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN2P17655 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN2P17655 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAPN2P17655 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CAPN2P17655 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.3■□□□□ 0.52
CAPN2P17655 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.3■□□□□ 0.52
CAPN2P17655 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN2P17655 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN2P17655 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.3■□□□□ 0.52
CAPN2P17655 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.3■□□□□ 0.52
CAPN2P17655 AL139099.5-201ENST00000635274 300 ntBASIC18.3■□□□□ 0.52
CAPN2P17655 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN2P17655 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN2P17655 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN2P17655 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN2P17655 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN2P17655 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN2P17655 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 AC104581.4-201ENST00000623126 3052 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 AC060834.1-201ENST00000443027 2032 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN2P17655 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 ACTG1P3-201ENST00000431775 1114 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 AL162726.2-201ENST00000438986 1017 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 AC079316.1-201ENST00000548397 411 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN2P17655 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN2P17655 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN2P17655 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CAPN2P17655 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 AC104640.1-201ENST00000562617 2109 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN2P17655 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN2P17655 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN2P17655 LINC00304-203ENST00000565008 1864 ntBASIC18.29■□□□□ 0.52
CAPN2P17655 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CAPN2P17655 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN2P17655 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN2P17655 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN2P17655 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN2P17655 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN2P17655 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN2P17655 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms