Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
TCF4P15884 AC069262.1-201ENST00000539058 672 ntBASIC16.5■□□□□ 0.23
TCF4P15884 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
TCF4P15884 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.5■□□□□ 0.23
TCF4P15884 Z92544.3-201ENST00000624747 417 ntBASIC16.5■□□□□ 0.23
TCF4P15884 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TCF4P15884 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TCF4P15884 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCF4P15884 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TCF4P15884 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 RPL37AP1-201ENST00000412502 279 ntBASIC16.49■□□□□ 0.23
TCF4P15884 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 TSEN15P1-201ENST00000423257 515 ntBASIC16.49■□□□□ 0.23
TCF4P15884 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.49■□□□□ 0.23
TCF4P15884 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.49■□□□□ 0.23
TCF4P15884 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.49■□□□□ 0.23
TCF4P15884 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.49■□□□□ 0.23
TCF4P15884 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.49■□□□□ 0.23
TCF4P15884 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.49■□□□□ 0.23
TCF4P15884 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
TCF4P15884 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 AL035456.1-201ENST00000456064 1369 ntBASIC16.49■□□□□ 0.23
TCF4P15884 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
TCF4P15884 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TCF4P15884 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCF4P15884 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TCF4P15884 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TCF4P15884 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TCF4P15884 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.48■□□□□ 0.23
TCF4P15884 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.48■□□□□ 0.23
TCF4P15884 TARDBPP1-201ENST00000442013 1203 ntBASIC16.48■□□□□ 0.23
TCF4P15884 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.48■□□□□ 0.23
TCF4P15884 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.48■□□□□ 0.23
TCF4P15884 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.48■□□□□ 0.23
TCF4P15884 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.48■□□□□ 0.23
TCF4P15884 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TCF4P15884 SPDYE12P-201ENST00000618416 771 ntBASIC16.48■□□□□ 0.23
TCF4P15884 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCF4P15884 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCF4P15884 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms