Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
IGHV4-38-2P0DP08 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-38-2P0DP08 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ACTG1P3-201ENST00000431775 1114 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 BCRP2-202ENST00000447763 634 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 BCRP6-201ENST00000510112 632 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 BCRP7-201ENST00000511549 544 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ENPP7P5-201ENST00000541031 1031 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 AC000095.1-201ENST00000603208 874 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 AC133552.6-201ENST00000613406 534 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 COX11-210ENST00000639671 696 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 PRORSD1P-202ENST00000563365 2154 ntBASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
IGHV4-38-2P0DP08 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 HLA-V-201ENST00000429037 534 ntBASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 KRT223P-202ENST00000449164 1292 ntBASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-38-2P0DP08 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms