Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AC068418.2-201ENST00000577309 3703 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 DNAJB3-201ENST00000446806 729 ntBASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 KRT8P23-201ENST00000560090 1207 ntBASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SSR4P1-203ENST00000599569 2260 ntBASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 AC126177.1-201ENST00000547829 2218 ntBASIC13.21□□□□□ -0.29
IGHV3-43DP0DP04 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
IGHV3-43DP0DP04 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.2□□□□□ -0.3
IGHV3-43DP0DP04 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms