Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CLTAP09496 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CLTAP09496 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLTAP09496 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLTAP09496 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLTAP09496 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.36■□□□□ 0.37
CLTAP09496 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CLTAP09496 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 AC002472.2-201ENST00000442739 958 ntBASIC17.36■□□□□ 0.37
CLTAP09496 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.36■□□□□ 0.37
CLTAP09496 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.36■□□□□ 0.37
CLTAP09496 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLTAP09496 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.36■□□□□ 0.37
CLTAP09496 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.36■□□□□ 0.37
CLTAP09496 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
CLTAP09496 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.36■□□□□ 0.37
CLTAP09496 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.36■□□□□ 0.37
CLTAP09496 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLTAP09496 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLTAP09496 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 REXO1L1P-202ENST00000608646 1974 ntBASIC17.35■□□□□ 0.37
CLTAP09496 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.35■□□□□ 0.37
CLTAP09496 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.35■□□□□ 0.37
CLTAP09496 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLTAP09496 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLTAP09496 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.35■□□□□ 0.37
CLTAP09496 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.35■□□□□ 0.37
CLTAP09496 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.35■□□□□ 0.37
CLTAP09496 AC009118.2-201ENST00000613275 655 ntBASIC17.35■□□□□ 0.37
CLTAP09496 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.35■□□□□ 0.37
CLTAP09496 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 AC010491.1-201ENST00000563101 2797 ntBASIC17.35■□□□□ 0.37
CLTAP09496 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLTAP09496 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 AC112504.1-201ENST00000623415 1841 ntBASIC17.35■□□□□ 0.37
CLTAP09496 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 AC011477.6-201ENST00000604980 1927 ntBASIC17.35■□□□□ 0.37
CLTAP09496 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.35■□□□□ 0.37
CLTAP09496 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLTAP09496 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLTAP09496 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 AC236430.1-201ENST00000402231 743 ntBASIC17.34■□□□□ 0.37
CLTAP09496 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.34■□□□□ 0.37
CLTAP09496 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.34■□□□□ 0.37
CLTAP09496 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CLTAP09496 AC114501.2-201ENST00000439631 535 ntBASIC17.34■□□□□ 0.37
CLTAP09496 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 PHKG1P2-201ENST00000457537 863 ntBASIC17.34■□□□□ 0.37
CLTAP09496 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.34■□□□□ 0.37
CLTAP09496 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.34■□□□□ 0.37
CLTAP09496 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.34■□□□□ 0.37
CLTAP09496 AC135586.1-201ENST00000539323 574 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms